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Moreover, utilizing orthogonal Chromatin Interaction testing by in-situ Paired-End Tag Sequencing (ChIA-PET) data, we verified that SCI sub-compartment prediction outperforms HMM. We show that SCI-predicted sub-compartments have actually distinct epigenetic markings, transcriptional tasks, and transcription element enrichment. Additionally, we provide a deep neural network to anticipate sub-compartments making use of epigenome, replication timing, and series data. Our neural community predict